Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sftpa1P35242 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.42□□□□□ -0.26
Sftpa1P35242 Gm9002-201ENSMUST00000178437 499 ntBASIC13.42□□□□□ -0.26
Sftpa1P35242 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sftpa1P35242 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.42□□□□□ -0.26
Sftpa1P35242 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Sftpa1P35242 Gm6916-202ENSMUST00000205523 195 ntBASIC13.42□□□□□ -0.26
Sftpa1P35242 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.42□□□□□ -0.26
Sftpa1P35242 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Sftpa1P35242 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.42□□□□□ -0.26
Sftpa1P35242 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sftpa1P35242 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sftpa1P35242 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Sftpa1P35242 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sftpa1P35242 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sftpa1P35242 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sftpa1P35242 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.42□□□□□ -0.26
Sftpa1P35242 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Sftpa1P35242 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC13.41□□□□□ -0.26
Sftpa1P35242 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sftpa1P35242 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.41□□□□□ -0.26
Sftpa1P35242 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.41□□□□□ -0.26
Sftpa1P35242 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sftpa1P35242 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sftpa1P35242 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sftpa1P35242 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sftpa1P35242 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sftpa1P35242 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sftpa1P35242 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sftpa1P35242 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sftpa1P35242 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sftpa1P35242 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC13.41□□□□□ -0.26
Sftpa1P35242 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sftpa1P35242 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.41□□□□□ -0.26
Sftpa1P35242 Gm37230-201ENSMUST00000194491 818 ntBASIC13.41□□□□□ -0.26
Sftpa1P35242 Gm38319-201ENSMUST00000194537 1266 ntBASIC13.41□□□□□ -0.26
Sftpa1P35242 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.41□□□□□ -0.26
Sftpa1P35242 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC13.41□□□□□ -0.26
Sftpa1P35242 Gm19220-201ENSMUST00000222682 803 ntBASIC13.41□□□□□ -0.26
Sftpa1P35242 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sftpa1P35242 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sftpa1P35242 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.41□□□□□ -0.26
Sftpa1P35242 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sftpa1P35242 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Sftpa1P35242 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sftpa1P35242 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sftpa1P35242 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sftpa1P35242 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Sftpa1P35242 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sftpa1P35242 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Sftpa1P35242 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sftpa1P35242 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Sftpa1P35242 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.4□□□□□ -0.26
Sftpa1P35242 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Sftpa1P35242 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Sftpa1P35242 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Sftpa1P35242 Gm4984-201ENSMUST00000115987 360 ntBASIC13.4□□□□□ -0.26
Sftpa1P35242 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC13.4□□□□□ -0.26
Sftpa1P35242 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.4□□□□□ -0.26
Sftpa1P35242 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.4□□□□□ -0.26
Sftpa1P35242 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.4□□□□□ -0.26
Sftpa1P35242 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.4□□□□□ -0.26
Sftpa1P35242 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.4□□□□□ -0.26
Sftpa1P35242 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.4□□□□□ -0.26
Sftpa1P35242 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Sftpa1P35242 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Sftpa1P35242 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC13.39□□□□□ -0.27
Sftpa1P35242 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Sftpa1P35242 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Sftpa1P35242 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms