Protein–RNA interactions for Protein: P18826

Phka1, Phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform, mousemouse

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phka1P18826 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Phka1P18826 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Phka1P18826 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Phka1P18826 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Phka1P18826 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Phka1P18826 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Phka1P18826 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.06■□□□□ 0.16
Phka1P18826 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Phka1P18826 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.05■□□□□ 0.16
Phka1P18826 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Phka1P18826 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Phka1P18826 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Phka1P18826 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Phka1P18826 Gm9726-201ENSMUST00000180321 678 ntBASIC16.05■□□□□ 0.16
Phka1P18826 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 Gm9229-201ENSMUST00000222777 126 ntBASIC16.05■□□□□ 0.16
Phka1P18826 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Phka1P18826 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Phka1P18826 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Phka1P18826 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.04■□□□□ 0.16
Phka1P18826 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC16.04■□□□□ 0.16
Phka1P18826 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC16.04■□□□□ 0.16
Phka1P18826 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
Phka1P18826 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.04■□□□□ 0.16
Phka1P18826 Gm9908-201ENSMUST00000211534 448 ntBASIC16.04■□□□□ 0.16
Phka1P18826 Gm9182-201ENSMUST00000217829 639 ntBASIC16.04■□□□□ 0.16
Phka1P18826 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.04■□□□□ 0.16
Phka1P18826 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Phka1P18826 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Phka1P18826 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Phka1P18826 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Phka1P18826 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Phka1P18826 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Phka1P18826 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Phka1P18826 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Phka1P18826 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.03■□□□□ 0.16
Phka1P18826 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.03■□□□□ 0.16
Phka1P18826 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Phka1P18826 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Phka1P18826 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Phka1P18826 Gm12091-201ENSMUST00000146791 830 ntBASIC16.03■□□□□ 0.16
Phka1P18826 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Phka1P18826 Gm8515-201ENSMUST00000194852 576 ntBASIC16.03■□□□□ 0.16
Phka1P18826 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Phka1P18826 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Phka1P18826 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Phka1P18826 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.03■□□□□ 0.16
Phka1P18826 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Phka1P18826 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Phka1P18826 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Phka1P18826 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Phka1P18826 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Phka1P18826 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Phka1P18826 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Phka1P18826 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Phka1P18826 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Phka1P18826 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Phka1P18826 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.02■□□□□ 0.16
Phka1P18826 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Phka1P18826 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms