Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm13829-201ENSMUST00000119600 138 ntBASIC12.82□□□□□ -0.36
Ccl3P10855 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Gm10275-202ENSMUST00000168697 495 ntBASIC12.82□□□□□ -0.36
Ccl3P10855 Gm44719-201ENSMUST00000206404 149 ntBASIC12.82□□□□□ -0.36
Ccl3P10855 Gm18062-201ENSMUST00000208020 547 ntBASIC12.82□□□□□ -0.36
Ccl3P10855 Gm18055-201ENSMUST00000208254 547 ntBASIC12.82□□□□□ -0.36
Ccl3P10855 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.82□□□□□ -0.36
Ccl3P10855 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.82□□□□□ -0.36
Ccl3P10855 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Gm10275-201ENSMUST00000092620 635 ntBASIC12.82□□□□□ -0.36
Ccl3P10855 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Ccl3P10855 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.82□□□□□ -0.36
Ccl3P10855 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Ccl3P10855 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccl3P10855 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccl3P10855 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccl3P10855 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Ccl3P10855 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccl3P10855 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
Ccl3P10855 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Gm15806-201ENSMUST00000120696 955 ntBASIC12.81□□□□□ -0.36
Ccl3P10855 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.81□□□□□ -0.36
Ccl3P10855 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Ccl3P10855 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.81□□□□□ -0.36
Ccl3P10855 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccl3P10855 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccl3P10855 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.81□□□□□ -0.36
Ccl3P10855 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Ccl3P10855 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.81□□□□□ -0.36
Ccl3P10855 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.81□□□□□ -0.36
Ccl3P10855 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Ccl3P10855 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Ccl3P10855 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.81□□□□□ -0.36
Ccl3P10855 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Ccl3P10855 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.8□□□□□ -0.36
Ccl3P10855 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Ccl3P10855 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.8□□□□□ -0.36
Ccl3P10855 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.8□□□□□ -0.36
Ccl3P10855 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Gm5354-201ENSMUST00000182417 973 ntBASIC12.8□□□□□ -0.36
Ccl3P10855 Mir7085-201ENSMUST00000184353 66 ntBASIC12.8□□□□□ -0.36
Ccl3P10855 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 AC125350.2-201ENSMUST00000224737 727 ntBASIC12.8□□□□□ -0.36
Ccl3P10855 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Ccl3P10855 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Sybu-209ENSMUST00000228639 4113 ntBASIC12.8□□□□□ -0.36
Ccl3P10855 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Ccl3P10855 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Ccl3P10855 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms