Protein–RNA interactions for Protein: P0CG49

Ubb, Polyubiquitin-B, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UbbP0CG49 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.69□□□□□ -0.38
UbbP0CG49 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC12.69□□□□□ -0.38
UbbP0CG49 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.69□□□□□ -0.38
UbbP0CG49 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC12.69□□□□□ -0.38
UbbP0CG49 Gm9682-201ENSMUST00000197505 556 ntBASIC12.69□□□□□ -0.38
UbbP0CG49 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.69□□□□□ -0.38
UbbP0CG49 AC160338.1-201ENSMUST00000214232 705 ntBASIC12.69□□□□□ -0.38
UbbP0CG49 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC12.69□□□□□ -0.38
UbbP0CG49 AC164567.1-201ENSMUST00000219185 960 ntBASIC12.69□□□□□ -0.38
UbbP0CG49 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.69□□□□□ -0.38
UbbP0CG49 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.69□□□□□ -0.38
UbbP0CG49 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
UbbP0CG49 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
UbbP0CG49 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UbbP0CG49 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbbP0CG49 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbbP0CG49 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbbP0CG49 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbbP0CG49 Gm3928-201ENSMUST00000121141 1307 ntBASIC12.68□□□□□ -0.38
UbbP0CG49 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbbP0CG49 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbbP0CG49 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
UbbP0CG49 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbbP0CG49 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbbP0CG49 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UbbP0CG49 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbbP0CG49 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.68□□□□□ -0.38
UbbP0CG49 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
UbbP0CG49 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
UbbP0CG49 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.68□□□□□ -0.38
UbbP0CG49 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbbP0CG49 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.68□□□□□ -0.38
UbbP0CG49 Gm7787-201ENSMUST00000216858 688 ntBASIC12.68□□□□□ -0.38
UbbP0CG49 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbbP0CG49 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbbP0CG49 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.68□□□□□ -0.38
UbbP0CG49 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
UbbP0CG49 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbbP0CG49 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbbP0CG49 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbbP0CG49 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
UbbP0CG49 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbbP0CG49 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
UbbP0CG49 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC12.67□□□□□ -0.38
UbbP0CG49 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
UbbP0CG49 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.67□□□□□ -0.38
UbbP0CG49 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
UbbP0CG49 Mir7071-201ENSMUST00000184847 69 ntBASIC12.67□□□□□ -0.38
UbbP0CG49 Gm17807-201ENSMUST00000186869 298 ntBASIC12.67□□□□□ -0.38
UbbP0CG49 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.67□□□□□ -0.38
UbbP0CG49 AC159106.1-201ENSMUST00000224421 690 ntBASIC12.67□□□□□ -0.38
UbbP0CG49 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.67□□□□□ -0.38
UbbP0CG49 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
UbbP0CG49 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.67□□□□□ -0.38
UbbP0CG49 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
UbbP0CG49 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms