Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13□□□□□ -0.33
P06344 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13□□□□□ -0.33
P06344 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06344 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06344 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
P06344 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06344 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06344 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
P06344 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06344 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
P06344 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
P06344 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.99□□□□□ -0.33
P06344 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.99□□□□□ -0.33
P06344 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
P06344 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.99□□□□□ -0.33
P06344 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.99□□□□□ -0.33
P06344 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.99□□□□□ -0.33
P06344 Gm9824-201ENSMUST00000178707 561 ntBASIC12.99□□□□□ -0.33
P06344 Mir6956-201ENSMUST00000183598 62 ntBASIC12.99□□□□□ -0.33
P06344 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC12.99□□□□□ -0.33
P06344 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.99□□□□□ -0.33
P06344 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.99□□□□□ -0.33
P06344 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.99□□□□□ -0.33
P06344 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.99□□□□□ -0.33
P06344 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.99□□□□□ -0.33
P06344 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
P06344 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
P06344 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
P06344 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
P06344 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.98□□□□□ -0.33
P06344 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.98□□□□□ -0.33
P06344 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
P06344 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
P06344 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.98□□□□□ -0.33
P06344 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.98□□□□□ -0.33
P06344 Gm2451-201ENSMUST00000199447 999 ntBASIC12.98□□□□□ -0.33
P06344 Gm10290-201ENSMUST00000200451 999 ntBASIC12.98□□□□□ -0.33
P06344 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12.98□□□□□ -0.33
P06344 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
P06344 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
P06344 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
P06344 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
P06344 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
P06344 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
P06344 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
P06344 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
P06344 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.97□□□□□ -0.33
P06344 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms