Protein–RNA interactions for Protein: P04214

T-cell receptor beta chain V region E1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04214 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04214 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04214 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04214 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.12■□□□□ 0.01
P04214 AL645783.1-201ENSMUST00000221416 1832 ntBASIC15.12■□□□□ 0.01
P04214 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04214 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04214 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04214 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04214 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04214 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04214 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04214 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04214 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
P04214 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04214 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
P04214 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.12■□□□□ 0.01
P04214 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.11■□□□□ 0.01
P04214 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC15.11■□□□□ 0.01
P04214 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.11■□□□□ 0.01
P04214 Gm42901-201ENSMUST00000197735 3171 ntBASIC15.11■□□□□ 0.01
P04214 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
P04214 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
P04214 Gm15429-201ENSMUST00000151268 798 ntBASIC15.11■□□□□ 0.01
P04214 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.11■□□□□ 0.01
P04214 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.11■□□□□ 0.01
P04214 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC15.11■□□□□ 0.01
P04214 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
P04214 Gm18905-201ENSMUST00000205454 928 ntBASIC15.11■□□□□ 0.01
P04214 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC15.11■□□□□ 0.01
P04214 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
P04214 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.11■□□□□ 0.01
P04214 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
P04214 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
P04214 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
P04214 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04214 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
P04214 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04214 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P04214 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04214 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.1■□□□□ 0.01
P04214 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P04214 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P04214 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04214 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.1■□□□□ 0.01
P04214 Mir1247-201ENSMUST00000116706 82 ntBASIC15.1■□□□□ 0.01
P04214 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC15.1■□□□□ 0.01
P04214 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC15.1■□□□□ 0.01
P04214 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
P04214 Gm27731-201ENSMUST00000185192 107 ntBASIC15.1■□□□□ 0.01
P04214 Gm43094-201ENSMUST00000196549 921 ntBASIC15.1■□□□□ 0.01
P04214 Gm9728-201ENSMUST00000200197 1055 ntBASIC15.1■□□□□ 0.01
P04214 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
P04214 Gm19078-201ENSMUST00000206311 727 ntBASIC15.1■□□□□ 0.01
P04214 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04214 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.1■□□□□ 0.01
P04214 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04214 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P04214 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
P04214 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC15.1■□□□□ 0.01
P04214 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P04214 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04214 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
P04214 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
P04214 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P04214 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P04214 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
P04214 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04214 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04214 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.09■□□□□ 0.01
P04214 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
P04214 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04214 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04214 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
P04214 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
P04214 Gm12928-201ENSMUST00000117115 573 ntBASIC15.09■□□□□ 0.01
P04214 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC15.09■□□□□ 0.01
P04214 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms