Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a1P02463 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a1P02463 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.64■□□□□ 0.41
Col4a1P02463 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col4a1P02463 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a1P02463 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Col4a1P02463 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a1P02463 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a1P02463 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a1P02463 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a1P02463 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Col4a1P02463 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a1P02463 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC17.63■□□□□ 0.41
Col4a1P02463 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a1P02463 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a1P02463 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a1P02463 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col4a1P02463 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a1P02463 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a1P02463 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a1P02463 Gm11524-201ENSMUST00000119349 807 ntBASIC17.62■□□□□ 0.41
Col4a1P02463 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC17.62■□□□□ 0.41
Col4a1P02463 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC17.62■□□□□ 0.41
Col4a1P02463 Gm27892-201ENSMUST00000185017 106 ntBASIC17.62■□□□□ 0.41
Col4a1P02463 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
Col4a1P02463 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a1P02463 Gm8598-201ENSMUST00000221184 836 ntBASIC17.62■□□□□ 0.41
Col4a1P02463 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a1P02463 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC17.62■□□□□ 0.41
Col4a1P02463 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a1P02463 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a1P02463 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a1P02463 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col4a1P02463 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Col4a1P02463 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a1P02463 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC17.61■□□□□ 0.41
Col4a1P02463 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC17.61■□□□□ 0.41
Col4a1P02463 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Col4a1P02463 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a1P02463 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a1P02463 AC139350.3-201ENSMUST00000226151 420 ntBASIC17.61■□□□□ 0.41
Col4a1P02463 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a1P02463 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a1P02463 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC17.61■□□□□ 0.41
Col4a1P02463 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a1P02463 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Col4a1P02463 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC17.61■□□□□ 0.41
Col4a1P02463 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a1P02463 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a1P02463 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a1P02463 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Col4a1P02463 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a1P02463 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC17.61■□□□□ 0.41
Col4a1P02463 Gm23931-201ENSMUST00000103842 109 ntBASIC17.61■□□□□ 0.41
Col4a1P02463 Gm13385-201ENSMUST00000121089 220 ntBASIC17.61■□□□□ 0.41
Col4a1P02463 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC17.61■□□□□ 0.41
Col4a1P02463 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a1P02463 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC17.61■□□□□ 0.41
Col4a1P02463 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col4a1P02463 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Col4a1P02463 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.6■□□□□ 0.41
Col4a1P02463 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a1P02463 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Col4a1P02463 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a1P02463 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a1P02463 Gm13226-201ENSMUST00000117838 404 ntBASIC17.6■□□□□ 0.41
Col4a1P02463 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
Col4a1P02463 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a1P02463 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a1P02463 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a1P02463 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a1P02463 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a1P02463 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a1P02463 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a1P02463 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a1P02463 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col4a1P02463 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Col4a1P02463 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
Col4a1P02463 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.6■□□□□ 0.41
Col4a1P02463 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a1P02463 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a1P02463 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.59■□□□□ 0.41
Col4a1P02463 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a1P02463 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
Col4a1P02463 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a1P02463 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC17.59■□□□□ 0.41
Col4a1P02463 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC17.59■□□□□ 0.41
Col4a1P02463 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a1P02463 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a1P02463 Gm45630-201ENSMUST00000210243 1911 ntBASIC17.59■□□□□ 0.41
Col4a1P02463 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a1P02463 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a1P02463 Gm21038-201ENSMUST00000222205 1383 ntBASIC17.59■□□□□ 0.41
Col4a1P02463 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a1P02463 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a1P02463 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a1P02463 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC17.59■□□□□ 0.41
Col4a1P02463 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a1P02463 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col4a1P02463 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms