Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igh-VJ558P01758 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Igh-VJ558P01758 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igh-VJ558P01758 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igh-VJ558P01758 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igh-VJ558P01758 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igh-VJ558P01758 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igh-VJ558P01758 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igh-VJ558P01758 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igh-VJ558P01758 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.6□□□□□ -0.39
Igh-VJ558P01758 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Igh-VJ558P01758 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Gm10275-202ENSMUST00000168697 495 ntBASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Gm45612-201ENSMUST00000211320 160 ntBASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Gm10275-201ENSMUST00000092620 635 ntBASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Igh-VJ558P01758 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.39
Igh-VJ558P01758 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Gm11025-201ENSMUST00000140773 466 ntBASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Gm17271-201ENSMUST00000165535 355 ntBASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Igh-VJ558P01758 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Igh-VJ558P01758 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Igh-VJ558P01758 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igh-VJ558P01758 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Igh-VJ558P01758 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Igh-VJ558P01758 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igh-VJ558P01758 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igh-VJ558P01758 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igh-VJ558P01758 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Igh-VJ558P01758 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC12.57□□□□□ -0.4
Igh-VJ558P01758 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Igh-VJ558P01758 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC12.57□□□□□ -0.4
Igh-VJ558P01758 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 211.8 ms