Protein–RNA interactions for Protein: P01572

Ifna1, Interferon alpha-1, mousemouse

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ifna1P01572 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ifna1P01572 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ifna1P01572 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
Ifna1P01572 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ifna1P01572 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Ifna1P01572 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ifna1P01572 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Ifna1P01572 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ifna1P01572 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.3□□□□□ -0.44
Ifna1P01572 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.3□□□□□ -0.44
Ifna1P01572 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ifna1P01572 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ifna1P01572 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Ifna1P01572 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.3□□□□□ -0.44
Ifna1P01572 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.3□□□□□ -0.44
Ifna1P01572 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ifna1P01572 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC12.3□□□□□ -0.44
Ifna1P01572 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.3□□□□□ -0.44
Ifna1P01572 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Ifna1P01572 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.3□□□□□ -0.44
Ifna1P01572 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ifna1P01572 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Ifna1P01572 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Ifna1P01572 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Ifna1P01572 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ifna1P01572 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Gm11780-201ENSMUST00000136880 516 ntBASIC12.29□□□□□ -0.44
Ifna1P01572 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ifna1P01572 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.29□□□□□ -0.44
Ifna1P01572 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.29□□□□□ -0.44
Ifna1P01572 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ifna1P01572 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ifna1P01572 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ifna1P01572 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
Ifna1P01572 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC12.29□□□□□ -0.44
Ifna1P01572 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ifna1P01572 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ifna1P01572 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ifna1P01572 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ifna1P01572 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ifna1P01572 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ifna1P01572 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.28□□□□□ -0.44
Ifna1P01572 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ifna1P01572 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ifna1P01572 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.28□□□□□ -0.44
Ifna1P01572 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ifna1P01572 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ifna1P01572 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ifna1P01572 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ifna1P01572 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms