Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Hcn3O88705 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn3O88705 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn3O88705 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.96□□□□□ -0.17
Hcn3O88705 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn3O88705 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Hcn3O88705 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.96□□□□□ -0.17
Hcn3O88705 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn3O88705 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn3O88705 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn3O88705 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn3O88705 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn3O88705 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
Hcn3O88705 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Hcn3O88705 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC13.96□□□□□ -0.17
Hcn3O88705 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC13.96□□□□□ -0.17
Hcn3O88705 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.96□□□□□ -0.17
Hcn3O88705 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn3O88705 Gm43767-201ENSMUST00000198933 381 ntBASIC13.96□□□□□ -0.17
Hcn3O88705 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn3O88705 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.96□□□□□ -0.17
Hcn3O88705 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.96□□□□□ -0.17
Hcn3O88705 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.96□□□□□ -0.17
Hcn3O88705 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Hcn3O88705 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC13.96□□□□□ -0.17
Hcn3O88705 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn3O88705 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn3O88705 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Hcn3O88705 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Hcn3O88705 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Hcn3O88705 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Hcn3O88705 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.96□□□□□ -0.18
Hcn3O88705 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hcn3O88705 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hcn3O88705 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Hcn3O88705 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Hcn3O88705 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Hcn3O88705 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Hcn3O88705 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 Gm27741-201ENSMUST00000185060 237 ntBASIC13.95□□□□□ -0.18
Hcn3O88705 Gm8655-201ENSMUST00000221159 852 ntBASIC13.95□□□□□ -0.18
Hcn3O88705 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Hcn3O88705 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Hcn3O88705 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
Hcn3O88705 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Hcn3O88705 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Hcn3O88705 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Hcn3O88705 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
Hcn3O88705 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
Hcn3O88705 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Gm15358-201ENSMUST00000119249 520 ntBASIC13.94□□□□□ -0.18
Hcn3O88705 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.94□□□□□ -0.18
Hcn3O88705 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Hcn3O88705 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.94□□□□□ -0.18
Hcn3O88705 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.94□□□□□ -0.18
Hcn3O88705 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Hcn3O88705 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Hcn3O88705 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Hcn3O88705 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hcn3O88705 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 237.3 ms