Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cops6O88545 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC17.74■□□□□ 0.43
Cops6O88545 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cops6O88545 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cops6O88545 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cops6O88545 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cops6O88545 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Cops6O88545 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cops6O88545 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cops6O88545 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cops6O88545 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Cops6O88545 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Cops6O88545 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cops6O88545 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cops6O88545 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cops6O88545 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cops6O88545 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cops6O88545 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.73■□□□□ 0.43
Cops6O88545 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cops6O88545 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.73■□□□□ 0.43
Cops6O88545 Gm33320-201ENSMUST00000192232 530 ntBASIC17.73■□□□□ 0.43
Cops6O88545 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC17.73■□□□□ 0.43
Cops6O88545 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cops6O88545 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cops6O88545 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Cops6O88545 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cops6O88545 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cops6O88545 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cops6O88545 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cops6O88545 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cops6O88545 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cops6O88545 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Cops6O88545 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.73■□□□□ 0.43
Cops6O88545 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cops6O88545 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Cops6O88545 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC17.73■□□□□ 0.43
Cops6O88545 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cops6O88545 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cops6O88545 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Cops6O88545 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.72■□□□□ 0.43
Cops6O88545 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cops6O88545 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cops6O88545 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cops6O88545 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cops6O88545 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cops6O88545 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cops6O88545 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC17.72■□□□□ 0.43
Cops6O88545 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cops6O88545 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cops6O88545 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cops6O88545 Gm10766-202ENSMUST00000194123 606 ntBASIC17.72■□□□□ 0.43
Cops6O88545 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC17.72■□□□□ 0.43
Cops6O88545 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Cops6O88545 AC154239.3-201ENSMUST00000226933 674 ntBASIC17.72■□□□□ 0.43
Cops6O88545 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cops6O88545 Gm9797-201ENSMUST00000052902 613 ntBASIC17.72■□□□□ 0.43
Cops6O88545 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cops6O88545 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cops6O88545 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cops6O88545 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cops6O88545 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.72■□□□□ 0.43
Cops6O88545 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.72■□□□□ 0.43
Cops6O88545 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Cops6O88545 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Cops6O88545 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Cops6O88545 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.72■□□□□ 0.43
Cops6O88545 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
Cops6O88545 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cops6O88545 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops6O88545 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops6O88545 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops6O88545 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC17.71■□□□□ 0.43
Cops6O88545 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops6O88545 Gm15460-201ENSMUST00000118147 391 ntBASIC17.71■□□□□ 0.43
Cops6O88545 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC17.71■□□□□ 0.43
Cops6O88545 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Cops6O88545 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Cops6O88545 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cops6O88545 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cops6O88545 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC17.71■□□□□ 0.43
Cops6O88545 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.71■□□□□ 0.43
Cops6O88545 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC17.71■□□□□ 0.43
Cops6O88545 AC154846.1-201ENSMUST00000226278 862 ntBASIC17.71■□□□□ 0.43
Cops6O88545 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops6O88545 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cops6O88545 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops6O88545 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.71■□□□□ 0.43
Cops6O88545 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cops6O88545 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops6O88545 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cops6O88545 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Cops6O88545 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops6O88545 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops6O88545 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Cops6O88545 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Cops6O88545 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops6O88545 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Cops6O88545 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Cops6O88545 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Cops6O88545 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms