Protein–RNA interactions for Protein: O70137

Alx3, Homeobox protein aristaless-like 3, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx3O70137 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Alx3O70137 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.3□□□□□ -0.28
Alx3O70137 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.3□□□□□ -0.28
Alx3O70137 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Alx3O70137 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.3□□□□□ -0.28
Alx3O70137 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Alx3O70137 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Alx3O70137 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Alx3O70137 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.29□□□□□ -0.28
Alx3O70137 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Alx3O70137 Gm7153-201ENSMUST00000117092 455 ntBASIC13.29□□□□□ -0.28
Alx3O70137 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.29□□□□□ -0.28
Alx3O70137 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC13.29□□□□□ -0.28
Alx3O70137 AC102523.2-201ENSMUST00000227813 983 ntBASIC13.29□□□□□ -0.28
Alx3O70137 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Gm10819-201ENSMUST00000099988 561 ntBASIC13.29□□□□□ -0.28
Alx3O70137 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Gm9519-201ENSMUST00000206108 1337 ntBASIC13.29□□□□□ -0.28
Alx3O70137 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Alx3O70137 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx3O70137 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Alx3O70137 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Alx3O70137 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Alx3O70137 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx3O70137 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx3O70137 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Alx3O70137 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx3O70137 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Alx3O70137 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx3O70137 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx3O70137 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.28□□□□□ -0.28
Alx3O70137 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC13.28□□□□□ -0.28
Alx3O70137 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Alx3O70137 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx3O70137 Gm27741-201ENSMUST00000185060 237 ntBASIC13.28□□□□□ -0.28
Alx3O70137 Gm17971-201ENSMUST00000190239 806 ntBASIC13.28□□□□□ -0.28
Alx3O70137 Gm10060-201ENSMUST00000212002 111 ntBASIC13.28□□□□□ -0.28
Alx3O70137 AC142191.1-201ENSMUST00000219217 699 ntTSL 5 BASIC13.28□□□□□ -0.28
Alx3O70137 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx3O70137 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Alx3O70137 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.28□□□□□ -0.28
Alx3O70137 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx3O70137 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx3O70137 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Alx3O70137 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx3O70137 Gm26540-201ENSMUST00000181858 1310 ntTSL 5 BASIC13.28□□□□□ -0.28
Alx3O70137 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Alx3O70137 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
Alx3O70137 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms