Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Pde6dO55057 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pde6dO55057 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pde6dO55057 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Pde6dO55057 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pde6dO55057 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pde6dO55057 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.49□□□□□ -0.57
Pde6dO55057 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC11.49□□□□□ -0.57
Pde6dO55057 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.49□□□□□ -0.57
Pde6dO55057 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pde6dO55057 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pde6dO55057 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pde6dO55057 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Pde6dO55057 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pde6dO55057 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pde6dO55057 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pde6dO55057 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pde6dO55057 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC11.49□□□□□ -0.57
Pde6dO55057 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pde6dO55057 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Pde6dO55057 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pde6dO55057 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.49□□□□□ -0.57
Pde6dO55057 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC11.49□□□□□ -0.57
Pde6dO55057 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pde6dO55057 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Pde6dO55057 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pde6dO55057 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Pde6dO55057 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Pde6dO55057 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Pde6dO55057 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC11.48□□□□□ -0.57
Pde6dO55057 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC11.48□□□□□ -0.57
Pde6dO55057 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Gm21559-201ENSMUST00000220638 855 ntBASIC11.48□□□□□ -0.57
Pde6dO55057 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC11.48□□□□□ -0.57
Pde6dO55057 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC11.48□□□□□ -0.57
Pde6dO55057 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC11.48□□□□□ -0.57
Pde6dO55057 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Gm8587-201ENSMUST00000076538 843 ntBASIC11.48□□□□□ -0.57
Pde6dO55057 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Pde6dO55057 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC11.48□□□□□ -0.57
Pde6dO55057 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Pde6dO55057 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC11.48□□□□□ -0.57
Pde6dO55057 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.48□□□□□ -0.57
Pde6dO55057 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Pde6dO55057 Gm4081-201ENSMUST00000195287 1838 ntBASIC11.48□□□□□ -0.57
Pde6dO55057 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Pde6dO55057 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Pde6dO55057 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Pde6dO55057 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC11.48□□□□□ -0.57
Pde6dO55057 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.48□□□□□ -0.57
Pde6dO55057 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC11.48□□□□□ -0.57
Pde6dO55057 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Pde6dO55057 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Pde6dO55057 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pde6dO55057 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pde6dO55057 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pde6dO55057 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pde6dO55057 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pde6dO55057 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pde6dO55057 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Pde6dO55057 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Pde6dO55057 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.47□□□□□ -0.57
Pde6dO55057 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pde6dO55057 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pde6dO55057 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pde6dO55057 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pde6dO55057 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pde6dO55057 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Pde6dO55057 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Pde6dO55057 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 92 ms