Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.34■□□□□ 0.37
Smarce1O54941 AC131709.1-201ENSMUST00000224731 1180 ntBASIC17.34■□□□□ 0.37
Smarce1O54941 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarce1O54941 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarce1O54941 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarce1O54941 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarce1O54941 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarce1O54941 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
Smarce1O54941 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarce1O54941 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Smarce1O54941 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarce1O54941 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarce1O54941 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarce1O54941 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Smarce1O54941 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Smarce1O54941 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Smarce1O54941 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarce1O54941 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Smarce1O54941 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smarce1O54941 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarce1O54941 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarce1O54941 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Smarce1O54941 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC17.33■□□□□ 0.36
Smarce1O54941 Gm14042-201ENSMUST00000120139 833 ntBASIC17.33■□□□□ 0.36
Smarce1O54941 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC17.33■□□□□ 0.36
Smarce1O54941 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Smarce1O54941 Gm2272-201ENSMUST00000194903 582 ntBASIC17.33■□□□□ 0.36
Smarce1O54941 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarce1O54941 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC17.33■□□□□ 0.36
Smarce1O54941 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarce1O54941 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarce1O54941 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarce1O54941 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarce1O54941 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarce1O54941 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
Smarce1O54941 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarce1O54941 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarce1O54941 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Smarce1O54941 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarce1O54941 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarce1O54941 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarce1O54941 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Smarce1O54941 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarce1O54941 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarce1O54941 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarce1O54941 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarce1O54941 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarce1O54941 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC17.32■□□□□ 0.36
Smarce1O54941 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarce1O54941 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarce1O54941 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC17.32■□□□□ 0.36
Smarce1O54941 Gm13036-201ENSMUST00000117799 748 ntBASIC17.32■□□□□ 0.36
Smarce1O54941 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.32■□□□□ 0.36
Smarce1O54941 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarce1O54941 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Smarce1O54941 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarce1O54941 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarce1O54941 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarce1O54941 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarce1O54941 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarce1O54941 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Smarce1O54941 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarce1O54941 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Smarce1O54941 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarce1O54941 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Smarce1O54941 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Smarce1O54941 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarce1O54941 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarce1O54941 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarce1O54941 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Smarce1O54941 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarce1O54941 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarce1O54941 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarce1O54941 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarce1O54941 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC17.31■□□□□ 0.36
Smarce1O54941 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarce1O54941 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarce1O54941 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarce1O54941 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.31■□□□□ 0.36
Smarce1O54941 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarce1O54941 Gm4691-201ENSMUST00000182339 1000 ntBASIC17.31■□□□□ 0.36
Smarce1O54941 Mir8098-201ENSMUST00000184011 137 ntBASIC17.31■□□□□ 0.36
Smarce1O54941 Gm2451-201ENSMUST00000199447 999 ntBASIC17.31■□□□□ 0.36
Smarce1O54941 Gm10290-201ENSMUST00000200451 999 ntBASIC17.31■□□□□ 0.36
Smarce1O54941 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarce1O54941 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC17.31■□□□□ 0.36
Smarce1O54941 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarce1O54941 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarce1O54941 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.31■□□□□ 0.36
Smarce1O54941 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smarce1O54941 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smarce1O54941 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Smarce1O54941 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarce1O54941 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
Smarce1O54941 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarce1O54941 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.31■□□□□ 0.36
Smarce1O54941 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarce1O54941 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smarce1O54941 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC17.31■□□□□ 0.36
Smarce1O54941 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms