Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 Gm22619-201ENSMUST00000179516 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm25255-201ENSMUST00000179579 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm24755-201ENSMUST00000179691 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm26506-201ENSMUST00000179692 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm25086-201ENSMUST00000179931 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm23243-201ENSMUST00000180047 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm24659-201ENSMUST00000180212 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm24169-201ENSMUST00000180244 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm23689-201ENSMUST00000180354 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.25□□□□□ -0.13
Npc1O35604 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm27359-201ENSMUST00000184153 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm27785-201ENSMUST00000184268 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm27466-201ENSMUST00000184396 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm27703-201ENSMUST00000184836 110 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm43474-201ENSMUST00000196415 774 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Npc1O35604 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC14.25□□□□□ -0.13
Npc1O35604 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Npc1O35604 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.25□□□□□ -0.13
Npc1O35604 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Npc1O35604 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Npc1O35604 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Npc1O35604 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Npc1O35604 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Npc1O35604 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Npc1O35604 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Npc1O35604 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Npc1O35604 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Npc1O35604 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.24□□□□□ -0.13
Npc1O35604 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Npc1O35604 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Npc1O35604 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.24□□□□□ -0.13
Npc1O35604 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Npc1O35604 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Npc1O35604 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.24□□□□□ -0.13
Npc1O35604 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Npc1O35604 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC14.24□□□□□ -0.13
Npc1O35604 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Npc1O35604 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Npc1O35604 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.24□□□□□ -0.13
Npc1O35604 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
Npc1O35604 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Npc1O35604 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Npc1O35604 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Npc1O35604 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Npc1O35604 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Npc1O35604 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Npc1O35604 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Npc1O35604 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Npc1O35604 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Npc1O35604 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Npc1O35604 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Npc1O35604 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.23□□□□□ -0.13
Npc1O35604 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Npc1O35604 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Npc1O35604 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.23□□□□□ -0.13
Npc1O35604 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.23□□□□□ -0.13
Npc1O35604 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Gm38225-201ENSMUST00000194001 393 ntBASIC14.23□□□□□ -0.13
Npc1O35604 Gm10253-201ENSMUST00000194270 940 ntBASIC14.23□□□□□ -0.13
Npc1O35604 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.23□□□□□ -0.13
Npc1O35604 Gm44872-201ENSMUST00000207864 420 ntBASIC14.23□□□□□ -0.13
Npc1O35604 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
Npc1O35604 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Npc1O35604 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.23□□□□□ -0.13
Npc1O35604 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Npc1O35604 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.23□□□□□ -0.13
Npc1O35604 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC14.23□□□□□ -0.13
Npc1O35604 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 143.2 ms