Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Atf6bO35451 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6bO35451 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6bO35451 Gm13410-201ENSMUST00000117058 1415 ntBASIC12.68□□□□□ -0.38
Atf6bO35451 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6bO35451 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6bO35451 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6bO35451 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6bO35451 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6bO35451 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6bO35451 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Atf6bO35451 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.68□□□□□ -0.38
Atf6bO35451 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6bO35451 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Atf6bO35451 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC12.67□□□□□ -0.38
Atf6bO35451 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
Atf6bO35451 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Atf6bO35451 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Atf6bO35451 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Gm14822-201ENSMUST00000122247 291 ntBASIC12.67□□□□□ -0.38
Atf6bO35451 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC12.67□□□□□ -0.38
Atf6bO35451 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC12.67□□□□□ -0.38
Atf6bO35451 Gm2756-201ENSMUST00000195851 400 ntBASIC12.67□□□□□ -0.38
Atf6bO35451 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Atf6bO35451 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Atf6bO35451 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Atf6bO35451 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Atf6bO35451 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.66□□□□□ -0.38
Atf6bO35451 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.66□□□□□ -0.38
Atf6bO35451 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Atf6bO35451 Gm6226-201ENSMUST00000117765 1146 ntBASIC12.66□□□□□ -0.38
Atf6bO35451 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Gm27702-201ENSMUST00000184512 56 ntBASIC12.66□□□□□ -0.38
Atf6bO35451 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.66□□□□□ -0.38
Atf6bO35451 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.66□□□□□ -0.38
Atf6bO35451 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.66□□□□□ -0.38
Atf6bO35451 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Atf6bO35451 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Atf6bO35451 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Atf6bO35451 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Atf6bO35451 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.66□□□□□ -0.38
Atf6bO35451 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.66□□□□□ -0.38
Atf6bO35451 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Atf6bO35451 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6bO35451 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Atf6bO35451 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Atf6bO35451 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6bO35451 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6bO35451 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6bO35451 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6bO35451 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6bO35451 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6bO35451 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Atf6bO35451 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atf6bO35451 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms