Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Tcof1O08784 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tcof1O08784 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tcof1O08784 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC17.05■□□□□ 0.32
Tcof1O08784 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC17.05■□□□□ 0.32
Tcof1O08784 Gm27618-201ENSMUST00000183671 60 ntBASIC17.05■□□□□ 0.32
Tcof1O08784 Wdyhv1-206ENSMUST00000227142 786 ntBASIC17.05■□□□□ 0.32
Tcof1O08784 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tcof1O08784 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tcof1O08784 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tcof1O08784 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Tcof1O08784 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tcof1O08784 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tcof1O08784 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tcof1O08784 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC17.05■□□□□ 0.32
Tcof1O08784 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tcof1O08784 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tcof1O08784 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Tcof1O08784 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tcof1O08784 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tcof1O08784 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tcof1O08784 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tcof1O08784 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tcof1O08784 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tcof1O08784 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tcof1O08784 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tcof1O08784 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tcof1O08784 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Tcof1O08784 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.04■□□□□ 0.32
Tcof1O08784 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tcof1O08784 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.04■□□□□ 0.32
Tcof1O08784 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tcof1O08784 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.04■□□□□ 0.32
Tcof1O08784 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tcof1O08784 Gm23547-201ENSMUST00000158210 271 ntBASIC17.04■□□□□ 0.32
Tcof1O08784 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tcof1O08784 Gm5186-201ENSMUST00000218781 920 ntBASIC17.04■□□□□ 0.32
Tcof1O08784 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Tcof1O08784 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tcof1O08784 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tcof1O08784 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Tcof1O08784 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Tcof1O08784 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tcof1O08784 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Tcof1O08784 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tcof1O08784 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tcof1O08784 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.04■□□□□ 0.32
Tcof1O08784 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.04■□□□□ 0.32
Tcof1O08784 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.04■□□□□ 0.32
Tcof1O08784 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tcof1O08784 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tcof1O08784 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Tcof1O08784 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tcof1O08784 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tcof1O08784 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tcof1O08784 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tcof1O08784 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Tcof1O08784 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC17.03■□□□□ 0.32
Tcof1O08784 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC17.03■□□□□ 0.32
Tcof1O08784 Gm28630-201ENSMUST00000187806 498 ntBASIC17.03■□□□□ 0.32
Tcof1O08784 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC17.03■□□□□ 0.32
Tcof1O08784 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Tcof1O08784 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Tcof1O08784 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Tcof1O08784 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Tcof1O08784 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Tcof1O08784 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Tcof1O08784 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Tcof1O08784 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tcof1O08784 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tcof1O08784 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tcof1O08784 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Tcof1O08784 Gm13223-201ENSMUST00000118609 747 ntBASIC17.02■□□□□ 0.32
Tcof1O08784 Gm6539-201ENSMUST00000119157 1064 ntBASIC17.02■□□□□ 0.32
Tcof1O08784 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC17.02■□□□□ 0.32
Tcof1O08784 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Tcof1O08784 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms