Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC15.77■□□□□ 0.12
Ube3aO08759 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ube3aO08759 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC15.77■□□□□ 0.11
Ube3aO08759 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Ube3aO08759 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ube3aO08759 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ube3aO08759 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Ube3aO08759 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ube3aO08759 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ube3aO08759 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Ube3aO08759 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ube3aO08759 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube3aO08759 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ube3aO08759 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube3aO08759 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ube3aO08759 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.76■□□□□ 0.11
Ube3aO08759 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube3aO08759 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube3aO08759 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.76■□□□□ 0.11
Ube3aO08759 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube3aO08759 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Ube3aO08759 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC15.76■□□□□ 0.11
Ube3aO08759 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC15.76■□□□□ 0.11
Ube3aO08759 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.76■□□□□ 0.11
Ube3aO08759 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube3aO08759 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube3aO08759 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube3aO08759 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC15.76■□□□□ 0.11
Ube3aO08759 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube3aO08759 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.76■□□□□ 0.11
Ube3aO08759 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Ube3aO08759 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube3aO08759 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube3aO08759 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
Ube3aO08759 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.76■□□□□ 0.11
Ube3aO08759 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube3aO08759 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ube3aO08759 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube3aO08759 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Ube3aO08759 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube3aO08759 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube3aO08759 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube3aO08759 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube3aO08759 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
Ube3aO08759 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Ube3aO08759 Gm13884-201ENSMUST00000118103 829 ntBASIC15.75■□□□□ 0.11
Ube3aO08759 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.75■□□□□ 0.11
Ube3aO08759 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ube3aO08759 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Ube3aO08759 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC15.75■□□□□ 0.11
Ube3aO08759 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.75■□□□□ 0.11
Ube3aO08759 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.75■□□□□ 0.11
Ube3aO08759 AC159301.1-201ENSMUST00000225130 1182 ntBASIC15.75■□□□□ 0.11
Ube3aO08759 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.75■□□□□ 0.11
Ube3aO08759 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube3aO08759 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube3aO08759 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.75■□□□□ 0.11
Ube3aO08759 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube3aO08759 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ube3aO08759 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube3aO08759 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ube3aO08759 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ube3aO08759 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC15.74■□□□□ 0.11
Ube3aO08759 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 Gm44771-201ENSMUST00000206975 626 ntBASIC15.74■□□□□ 0.11
Ube3aO08759 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.74■□□□□ 0.11
Ube3aO08759 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.74■□□□□ 0.11
Ube3aO08759 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Ube3aO08759 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.74■□□□□ 0.11
Ube3aO08759 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ube3aO08759 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube3aO08759 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ube3aO08759 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube3aO08759 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Ube3aO08759 AC166491.1-201ENSMUST00000227053 2308 ntBASIC15.73■□□□□ 0.11
Ube3aO08759 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube3aO08759 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ube3aO08759 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ube3aO08759 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms