Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Gm18905-201ENSMUST00000205454 928 ntBASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 AC166349.1-201ENSMUST00000220866 695 ntBASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 AC110817.1-201ENSMUST00000225706 605 ntBASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
B020004C17RikJ3QP07 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Gm12390-201ENSMUST00000117897 397 ntBASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Gm5303-201ENSMUST00000117943 1252 ntBASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Mup-ps23-201ENSMUST00000118063 630 ntBASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Gm6007-201ENSMUST00000208170 823 ntBASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Rhox2e-201ENSMUST00000072167 799 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
B020004C17RikJ3QP07 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
B020004C17RikJ3QP07 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
B020004C17RikJ3QP07 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Gm45841-201ENSMUST00000207700 164 ntBASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 AC125117.1-201ENSMUST00000228121 468 ntBASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 AC131068.2-201ENSMUST00000226175 1453 ntBASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
B020004C17RikJ3QP07 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms