Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Shisa8J3QNX5 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Gm12644-201ENSMUST00000119935 606 ntBASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Gm15372-201ENSMUST00000120729 834 ntBASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Gm13836-201ENSMUST00000121159 501 ntBASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa8J3QNX5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Gm12895-201ENSMUST00000122214 226 ntBASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Gm11780-201ENSMUST00000136880 516 ntBASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Gm37584-201ENSMUST00000193595 1290 ntBASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Shisa8J3QNX5 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa8J3QNX5 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa8J3QNX5 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa8J3QNX5 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa8J3QNX5 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa8J3QNX5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Shisa8J3QNX5 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Shisa8J3QNX5 Gm7284-201ENSMUST00000131667 944 ntBASIC13.29□□□□□ -0.28
Shisa8J3QNX5 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa8J3QNX5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa8J3QNX5 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa8J3QNX5 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa8J3QNX5 AC122901.1-201ENSMUST00000214203 1790 ntBASIC13.29□□□□□ -0.28
Shisa8J3QNX5 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa8J3QNX5 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa8J3QNX5 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Shisa8J3QNX5 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa8J3QNX5 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.28□□□□□ -0.28
Shisa8J3QNX5 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms