Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Colca2F8VPY8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.67□□□□□ -0.22
Colca2F8VPY8 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Colca2F8VPY8 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Gm23931-201ENSMUST00000103842 109 ntBASIC13.66□□□□□ -0.22
Colca2F8VPY8 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Gm12384-201ENSMUST00000119228 919 ntBASIC13.66□□□□□ -0.22
Colca2F8VPY8 Gm15376-201ENSMUST00000122258 783 ntBASIC13.66□□□□□ -0.22
Colca2F8VPY8 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.66□□□□□ -0.22
Colca2F8VPY8 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Colca2F8VPY8 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.66□□□□□ -0.22
Colca2F8VPY8 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Colca2F8VPY8 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Colca2F8VPY8 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Gm5187-201ENSMUST00000117317 991 ntBASIC13.65□□□□□ -0.22
Colca2F8VPY8 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC13.65□□□□□ -0.22
Colca2F8VPY8 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Gm6983-201ENSMUST00000214912 628 ntBASIC13.65□□□□□ -0.22
Colca2F8VPY8 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Colca2F8VPY8 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.65□□□□□ -0.22
Colca2F8VPY8 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.64□□□□□ -0.23
Colca2F8VPY8 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Gm5940-201ENSMUST00000117582 1068 ntBASIC13.64□□□□□ -0.23
Colca2F8VPY8 Gm13612-201ENSMUST00000119276 390 ntBASIC13.64□□□□□ -0.23
Colca2F8VPY8 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Gm27514-201ENSMUST00000183692 110 ntBASIC13.64□□□□□ -0.23
Colca2F8VPY8 Gm27572-201ENSMUST00000183702 255 ntBASIC13.64□□□□□ -0.23
Colca2F8VPY8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Gm7399-201ENSMUST00000032395 858 ntBASIC13.64□□□□□ -0.23
Colca2F8VPY8 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Colca2F8VPY8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms