Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Pcdh9F8VPK8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.02
Pcdh9F8VPK8 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh9F8VPK8 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh9F8VPK8 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh9F8VPK8 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh9F8VPK8 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Pcdh9F8VPK8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.02
Pcdh9F8VPK8 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdh9F8VPK8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdh9F8VPK8 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Gm16026-204ENSMUST00000162652 683 ntBASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdh9F8VPK8 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdh9F8VPK8 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms