Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdh1F7BJK1 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Gm44357-201ENSMUST00000195897 142 ntBASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Gm19658-201ENSMUST00000196231 138 ntBASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Gm44367-201ENSMUST00000196836 138 ntBASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Gm44350-201ENSMUST00000197197 138 ntBASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Gm44390-201ENSMUST00000197533 144 ntBASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Gm44313-201ENSMUST00000198018 138 ntBASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Gm44486-201ENSMUST00000198508 138 ntBASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Gm44314-201ENSMUST00000199263 138 ntBASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Gm44394-201ENSMUST00000199558 138 ntBASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Gm44484-201ENSMUST00000199873 138 ntBASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Gm44466-201ENSMUST00000200264 138 ntBASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Gm44359-201ENSMUST00000200671 138 ntBASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Birc2-201ENSMUST00000054878 378 ntBASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdh1F7BJK1 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Gm9726-201ENSMUST00000180321 678 ntBASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Gm10819-201ENSMUST00000099988 561 ntBASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdh1F7BJK1 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh1F7BJK1 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh1F7BJK1 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.1□□□□□ -0.31
Pcdh1F7BJK1 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh1F7BJK1 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh1F7BJK1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh1F7BJK1 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh1F7BJK1 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdh1F7BJK1 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Pcdh1F7BJK1 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh1F7BJK1 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh1F7BJK1 Gm13464-201ENSMUST00000119418 935 ntBASIC13.1□□□□□ -0.31
Pcdh1F7BJK1 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdh1F7BJK1 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.1□□□□□ -0.31
Pcdh1F7BJK1 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms