Protein–RNA interactions for Protein: F6UCX4

Sptbn5, Spectrin beta, non-erythrocytic 5 (Fragment), mousemouse

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn5F6UCX4 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn5F6UCX4 Gm37153-201ENSMUST00000193637 231 ntBASIC17.47■□□□□ 0.39
Sptbn5F6UCX4 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn5F6UCX4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn5F6UCX4 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Sptbn5F6UCX4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn5F6UCX4 Gm11405-201ENSMUST00000118689 1556 ntBASIC17.47■□□□□ 0.39
Sptbn5F6UCX4 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn5F6UCX4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn5F6UCX4 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn5F6UCX4 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn5F6UCX4 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn5F6UCX4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC17.47■□□□□ 0.39
Sptbn5F6UCX4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn5F6UCX4 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn5F6UCX4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC17.47■□□□□ 0.39
Sptbn5F6UCX4 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn5F6UCX4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn5F6UCX4 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn5F6UCX4 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sptbn5F6UCX4 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 Gm4535-201ENSMUST00000182274 558 ntBASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 Gm10355-201ENSMUST00000097146 517 ntBASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sptbn5F6UCX4 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sptbn5F6UCX4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Gm38102-201ENSMUST00000192791 1935 ntBASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sptbn5F6UCX4 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sptbn5F6UCX4 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms