Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Ube4aE9Q735 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Ube4aE9Q735 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube4aE9Q735 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.43■□□□□ 0.38
Ube4aE9Q735 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.43■□□□□ 0.38
Ube4aE9Q735 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube4aE9Q735 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Ube4aE9Q735 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube4aE9Q735 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.43■□□□□ 0.38
Ube4aE9Q735 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC17.43■□□□□ 0.38
Ube4aE9Q735 Gm23984-201ENSMUST00000157139 203 ntBASIC17.43■□□□□ 0.38
Ube4aE9Q735 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC17.43■□□□□ 0.38
Ube4aE9Q735 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC17.43■□□□□ 0.38
Ube4aE9Q735 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube4aE9Q735 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC17.43■□□□□ 0.38
Ube4aE9Q735 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
Ube4aE9Q735 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.43■□□□□ 0.38
Ube4aE9Q735 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ube4aE9Q735 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube4aE9Q735 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube4aE9Q735 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Ube4aE9Q735 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ube4aE9Q735 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC17.42■□□□□ 0.38
Ube4aE9Q735 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ube4aE9Q735 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Gm37917-201ENSMUST00000194711 392 ntBASIC17.42■□□□□ 0.38
Ube4aE9Q735 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ube4aE9Q735 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Gm6745-201ENSMUST00000199216 526 ntBASIC17.42■□□□□ 0.38
Ube4aE9Q735 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube4aE9Q735 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ube4aE9Q735 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.41■□□□□ 0.38
Ube4aE9Q735 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC17.41■□□□□ 0.38
Ube4aE9Q735 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube4aE9Q735 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube4aE9Q735 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube4aE9Q735 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Ube4aE9Q735 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube4aE9Q735 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube4aE9Q735 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ube4aE9Q735 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube4aE9Q735 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC17.41■□□□□ 0.38
Ube4aE9Q735 Ighv5-13-201ENSMUST00000193550 290 ntBASIC17.41■□□□□ 0.38
Ube4aE9Q735 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC17.41■□□□□ 0.38
Ube4aE9Q735 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube4aE9Q735 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube4aE9Q735 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Ube4aE9Q735 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ube4aE9Q735 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube4aE9Q735 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube4aE9Q735 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube4aE9Q735 Gm42632-201ENSMUST00000201707 2411 ntBASIC17.41■□□□□ 0.38
Ube4aE9Q735 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ube4aE9Q735 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ube4aE9Q735 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC17.4■□□□□ 0.38
Ube4aE9Q735 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC17.4■□□□□ 0.38
Ube4aE9Q735 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Ube4aE9Q735 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC17.4■□□□□ 0.38
Ube4aE9Q735 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC17.4■□□□□ 0.38
Ube4aE9Q735 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms