Protein–RNA interactions for Protein: D3Z4R4

Nkx6-2, NK6 homeobox 2, mousemouse

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-2D3Z4R4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Gm6257-201ENSMUST00000163864 910 ntBASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Gm7791-201ENSMUST00000219066 539 ntBASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx6-2D3Z4R4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nkx6-2D3Z4R4 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Pck2-205ENSMUST00000226352 2784 ntBASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx6-2D3Z4R4 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Timm23-208ENSMUST00000226683 750 ntBASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Gm7002-201ENSMUST00000221386 2165 ntBASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Il17rd-203ENSMUST00000225146 3366 ntBASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.82□□□□□ -0.52
Nkx6-2D3Z4R4 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms