Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Col4a6B1AVK5 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Col4a6B1AVK5 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a6B1AVK5 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a6B1AVK5 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.74□□□□□ -0.05
Col4a6B1AVK5 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.74□□□□□ -0.05
Col4a6B1AVK5 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col4a6B1AVK5 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.73□□□□□ -0.05
Col4a6B1AVK5 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a6B1AVK5 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a6B1AVK5 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a6B1AVK5 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
Col4a6B1AVK5 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a6B1AVK5 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC14.73□□□□□ -0.05
Col4a6B1AVK5 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a6B1AVK5 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a6B1AVK5 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a6B1AVK5 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Col4a6B1AVK5 Mir3547-201ENSMUST00000175461 88 ntBASIC14.73□□□□□ -0.05
Col4a6B1AVK5 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Col4a6B1AVK5 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a6B1AVK5 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a6B1AVK5 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a6B1AVK5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a6B1AVK5 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col4a6B1AVK5 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Col4a6B1AVK5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a6B1AVK5 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a6B1AVK5 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.71□□□□□ -0.05
Col4a6B1AVK5 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a6B1AVK5 Gm27772-201ENSMUST00000184900 187 ntBASIC14.71□□□□□ -0.05
Col4a6B1AVK5 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a6B1AVK5 Gm18054-201ENSMUST00000207539 555 ntBASIC14.71□□□□□ -0.05
Col4a6B1AVK5 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.71□□□□□ -0.05
Col4a6B1AVK5 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14.71□□□□□ -0.05
Col4a6B1AVK5 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a6B1AVK5 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a6B1AVK5 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a6B1AVK5 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a6B1AVK5 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a6B1AVK5 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a6B1AVK5 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.71□□□□□ -0.05
Col4a6B1AVK5 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a6B1AVK5 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col4a6B1AVK5 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a6B1AVK5 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col4a6B1AVK5 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Col4a6B1AVK5 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.71□□□□□ -0.05
Col4a6B1AVK5 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Col4a6B1AVK5 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.71□□□□□ -0.06
Col4a6B1AVK5 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Col4a6B1AVK5 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Col4a6B1AVK5 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC14.71□□□□□ -0.06
Col4a6B1AVK5 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col4a6B1AVK5 Gm43179-201ENSMUST00000198797 275 ntBASIC14.71□□□□□ -0.06
Col4a6B1AVK5 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col4a6B1AVK5 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col4a6B1AVK5 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Col4a6B1AVK5 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Col4a6B1AVK5 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Col4a6B1AVK5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Zscan30-202ENSMUST00000224144 1458 ntBASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
Col4a6B1AVK5 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.7□□□□□ -0.06
Col4a6B1AVK5 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms