Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.07■□□□□ 0.16
Krt28A6BLY7 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Krt28A6BLY7 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Krt28A6BLY7 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Krt28A6BLY7 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Krt28A6BLY7 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Krt28A6BLY7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Krt28A6BLY7 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Krt28A6BLY7 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Krt28A6BLY7 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Krt28A6BLY7 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Krt28A6BLY7 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Krt28A6BLY7 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Krt28A6BLY7 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Krt28A6BLY7 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC16.06■□□□□ 0.16
Krt28A6BLY7 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC16.06■□□□□ 0.16
Krt28A6BLY7 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Krt28A6BLY7 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Krt28A6BLY7 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.06■□□□□ 0.16
Krt28A6BLY7 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.06■□□□□ 0.16
Krt28A6BLY7 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Krt28A6BLY7 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Krt28A6BLY7 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.06■□□□□ 0.16
Krt28A6BLY7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Krt28A6BLY7 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Krt28A6BLY7 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.06■□□□□ 0.16
Krt28A6BLY7 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Krt28A6BLY7 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Krt28A6BLY7 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Gm5049-201ENSMUST00000195878 1590 ntBASIC16.05■□□□□ 0.16
Krt28A6BLY7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.05■□□□□ 0.16
Krt28A6BLY7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Gm11814-201ENSMUST00000119515 929 ntBASIC16.05■□□□□ 0.16
Krt28A6BLY7 Gm14660-201ENSMUST00000119809 575 ntBASIC16.05■□□□□ 0.16
Krt28A6BLY7 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.05■□□□□ 0.16
Krt28A6BLY7 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Krt28A6BLY7 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Krt28A6BLY7 Dancr-204ENSMUST00000132389 2347 ntBASIC16.05■□□□□ 0.16
Krt28A6BLY7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt28A6BLY7 Zscan30-202ENSMUST00000224144 1458 ntBASIC16.04■□□□□ 0.16
Krt28A6BLY7 Gm5912-201ENSMUST00000122282 1438 ntBASIC16.04■□□□□ 0.16
Krt28A6BLY7 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt28A6BLY7 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt28A6BLY7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt28A6BLY7 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt28A6BLY7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt28A6BLY7 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt28A6BLY7 Gm27847-201ENSMUST00000183711 107 ntBASIC16.04■□□□□ 0.16
Krt28A6BLY7 Gm27375-201ENSMUST00000183799 107 ntBASIC16.04■□□□□ 0.16
Krt28A6BLY7 Gm43179-201ENSMUST00000198797 275 ntBASIC16.04■□□□□ 0.16
Krt28A6BLY7 Gm5425-201ENSMUST00000214125 459 ntBASIC16.04■□□□□ 0.16
Krt28A6BLY7 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC16.04■□□□□ 0.16
Krt28A6BLY7 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt28A6BLY7 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Krt28A6BLY7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt28A6BLY7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
Krt28A6BLY7 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
Krt28A6BLY7 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt28A6BLY7 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt28A6BLY7 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt28A6BLY7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt28A6BLY7 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt28A6BLY7 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Krt28A6BLY7 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Krt28A6BLY7 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.03■□□□□ 0.16
Krt28A6BLY7 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Krt28A6BLY7 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.03■□□□□ 0.16
Krt28A6BLY7 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Krt28A6BLY7 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Krt28A6BLY7 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Krt28A6BLY7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms