Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Chd6A3KFM7 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.69□□□□□ -0.54
Chd6A3KFM7 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
Chd6A3KFM7 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Gm38671-201ENSMUST00000200573 130 ntBASIC11.69□□□□□ -0.54
Chd6A3KFM7 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Chd6A3KFM7 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.69□□□□□ -0.54
Chd6A3KFM7 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Gm37489-201ENSMUST00000191883 159 ntBASIC11.68□□□□□ -0.54
Chd6A3KFM7 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Chd6A3KFM7 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC11.68□□□□□ -0.54
Chd6A3KFM7 Gm6983-201ENSMUST00000214912 628 ntBASIC11.68□□□□□ -0.54
Chd6A3KFM7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Gm13337-201ENSMUST00000119183 1594 ntBASIC11.68□□□□□ -0.54
Chd6A3KFM7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Chd6A3KFM7 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Gm45219-201ENSMUST00000205602 465 ntBASIC11.67□□□□□ -0.54
Chd6A3KFM7 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Gm45770-201ENSMUST00000212105 616 ntBASIC11.67□□□□□ -0.54
Chd6A3KFM7 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.67□□□□□ -0.54
Chd6A3KFM7 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.67□□□□□ -0.54
Chd6A3KFM7 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC11.67□□□□□ -0.54
Chd6A3KFM7 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd6A3KFM7 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Itpr3os-201ENSMUST00000143605 794 ntTSL 2 BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Chd6A3KFM7 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Chd6A3KFM7 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms