Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Col6a4A2AX52 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a4A2AX52 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.27□□□□□ -0.44
Col6a4A2AX52 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a4A2AX52 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.27□□□□□ -0.44
Col6a4A2AX52 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a4A2AX52 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Col6a4A2AX52 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a4A2AX52 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.27□□□□□ -0.44
Col6a4A2AX52 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Col6a4A2AX52 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a4A2AX52 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.27□□□□□ -0.45
Col6a4A2AX52 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Col6a4A2AX52 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Gm7556-201ENSMUST00000201178 1084 ntBASIC12.26□□□□□ -0.45
Col6a4A2AX52 Gm9229-201ENSMUST00000222777 126 ntBASIC12.26□□□□□ -0.45
Col6a4A2AX52 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Gm7820-201ENSMUST00000121012 1052 ntBASIC12.26□□□□□ -0.45
Col6a4A2AX52 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC12.26□□□□□ -0.45
Col6a4A2AX52 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Col6a4A2AX52 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms