Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.21■□□□□ 0.03
Scn1aA2APX8 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Scn1aA2APX8 Gm9229-201ENSMUST00000222777 126 ntBASIC15.21■□□□□ 0.03
Scn1aA2APX8 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn1aA2APX8 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn1aA2APX8 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn1aA2APX8 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn1aA2APX8 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn1aA2APX8 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn1aA2APX8 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn1aA2APX8 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.21■□□□□ 0.03
Scn1aA2APX8 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn1aA2APX8 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn1aA2APX8 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn1aA2APX8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Scn1aA2APX8 Gm14451-201ENSMUST00000121581 1542 ntBASIC15.21■□□□□ 0.03
Scn1aA2APX8 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Scn1aA2APX8 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Scn1aA2APX8 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn1aA2APX8 Ssr1-204ENSMUST00000225319 1610 ntBASIC15.21■□□□□ 0.02
Scn1aA2APX8 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn1aA2APX8 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn1aA2APX8 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn1aA2APX8 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
Scn1aA2APX8 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn1aA2APX8 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.21■□□□□ 0.02
Scn1aA2APX8 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn1aA2APX8 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Scn1aA2APX8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.2■□□□□ 0.02
Scn1aA2APX8 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Gm22189-201ENSMUST00000103822 86 ntBASIC15.2■□□□□ 0.02
Scn1aA2APX8 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.2■□□□□ 0.02
Scn1aA2APX8 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn1aA2APX8 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Scn1aA2APX8 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.2■□□□□ 0.02
Scn1aA2APX8 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Scn1aA2APX8 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Scn1aA2APX8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Gm29667-201ENSMUST00000190817 490 ntBASIC15.19■□□□□ 0.02
Scn1aA2APX8 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn1aA2APX8 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.19■□□□□ 0.02
Scn1aA2APX8 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Scn1aA2APX8 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Scn1aA2APX8 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn1aA2APX8 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC15.18■□□□□ 0.02
Scn1aA2APX8 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.18■□□□□ 0.02
Scn1aA2APX8 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Scn1aA2APX8 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn1aA2APX8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Scn1aA2APX8 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Scn1aA2APX8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn1aA2APX8 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn1aA2APX8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn1aA2APX8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Scn1aA2APX8 Gm24694-201ENSMUST00000180054 110 ntBASIC15.18■□□□□ 0.02
Scn1aA2APX8 Gm27663-201ENSMUST00000184839 110 ntBASIC15.18■□□□□ 0.02
Scn1aA2APX8 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms