Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav12d-1A0N8R0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Gm25990-201ENSMUST00000102440 86 ntBASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Gm18246-201ENSMUST00000221023 728 ntBASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav12d-1A0N8R0 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Gm42769-201ENSMUST00000198576 1659 ntBASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav12d-1A0N8R0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav12d-1A0N8R0 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms