Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Gm12895-201ENSMUST00000122214 226 ntBASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Gm27646-201ENSMUST00000183989 110 ntBASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Gm15372-201ENSMUST00000120729 834 ntBASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 AC154471.1-201ENSMUST00000224418 436 ntBASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Trav13-4-dv7A0A075B6C2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 48.8 ms