Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
PdfS4R2K0 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdfS4R2K0 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PdfS4R2K0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdfS4R2K0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.23□□□□□ -0.61
PdfS4R2K0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PdfS4R2K0 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC11.23□□□□□ -0.61
PdfS4R2K0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.23□□□□□ -0.61
PdfS4R2K0 Gm44454-201ENSMUST00000198541 138 ntBASIC11.23□□□□□ -0.61
PdfS4R2K0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
PdfS4R2K0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdfS4R2K0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
PdfS4R2K0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdfS4R2K0 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PdfS4R2K0 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
PdfS4R2K0 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PdfS4R2K0 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdfS4R2K0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdfS4R2K0 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdfS4R2K0 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdfS4R2K0 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
PdfS4R2K0 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
PdfS4R2K0 Gm38318-201ENSMUST00000195769 1706 ntBASIC11.23□□□□□ -0.61
PdfS4R2K0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
PdfS4R2K0 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
PdfS4R2K0 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
PdfS4R2K0 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
PdfS4R2K0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
PdfS4R2K0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.22□□□□□ -0.61
PdfS4R2K0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
PdfS4R2K0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.22□□□□□ -0.61
PdfS4R2K0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
PdfS4R2K0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.22□□□□□ -0.61
PdfS4R2K0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC11.22□□□□□ -0.61
PdfS4R2K0 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
PdfS4R2K0 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.22□□□□□ -0.61
PdfS4R2K0 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
PdfS4R2K0 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.22□□□□□ -0.61
PdfS4R2K0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
PdfS4R2K0 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdfS4R2K0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
PdfS4R2K0 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC11.21□□□□□ -0.61
PdfS4R2K0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
PdfS4R2K0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
PdfS4R2K0 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdfS4R2K0 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdfS4R2K0 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
PdfS4R2K0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdfS4R2K0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdfS4R2K0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdfS4R2K0 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdfS4R2K0 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdfS4R2K0 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdfS4R2K0 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdfS4R2K0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdfS4R2K0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC11.21□□□□□ -0.61
PdfS4R2K0 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
PdfS4R2K0 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC11.21□□□□□ -0.61
PdfS4R2K0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC11.21□□□□□ -0.61
PdfS4R2K0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdfS4R2K0 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
PdfS4R2K0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdfS4R2K0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdfS4R2K0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
PdfS4R2K0 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC11.21□□□□□ -0.61
PdfS4R2K0 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
PdfS4R2K0 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PdfS4R2K0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
PdfS4R2K0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
PdfS4R2K0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
PdfS4R2K0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PdfS4R2K0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
PdfS4R2K0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
PdfS4R2K0 Gm14780-201ENSMUST00000118387 2737 ntBASIC11.21□□□□□ -0.62
PdfS4R2K0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
PdfS4R2K0 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
PdfS4R2K0 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms