Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Smarcb1Q9Z0H3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Gm45751-201ENSMUST00000210185 1573 ntBASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Gm13034-201ENSMUST00000121342 3177 ntBASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Gm14719-201ENSMUST00000121891 340 ntBASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Gm46209-201ENSMUST00000217912 553 ntBASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Smarcb1Q9Z0H3 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Gm5866-201ENSMUST00000177881 973 ntBASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Gm5626-201ENSMUST00000222151 1058 ntBASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Gm9229-201ENSMUST00000222777 126 ntBASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 CT025535.1-201ENSMUST00000227172 491 ntBASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Smarcb1Q9Z0H3 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 BC001981-202ENSMUST00000191393 1545 ntBASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Smarcb1Q9Z0H3 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms