Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Gm25911-201ENSMUST00000157621 56 ntBASIC13.76□□□□□ -0.21
Trim3Q9R1R2 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Gm17968-201ENSMUST00000194902 784 ntBASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trim3Q9R1R2 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim3Q9R1R2 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Gm5177-201ENSMUST00000183092 997 ntBASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Gm5867-201ENSMUST00000063197 592 ntBASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Trim3Q9R1R2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trim3Q9R1R2 AC148324.1-201ENSMUST00000219034 4240 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms