Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh17Q9R100 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh17Q9R100 Gm16198-201ENSMUST00000118766 670 ntBASIC14.24□□□□□ -0.13
Cdh17Q9R100 Gm14042-201ENSMUST00000120139 833 ntBASIC14.24□□□□□ -0.13
Cdh17Q9R100 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.24□□□□□ -0.13
Cdh17Q9R100 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.24□□□□□ -0.13
Cdh17Q9R100 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.24□□□□□ -0.13
Cdh17Q9R100 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cdh17Q9R100 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.24□□□□□ -0.13
Cdh17Q9R100 Gm10154-201ENSMUST00000084445 354 ntBASIC14.24□□□□□ -0.13
Cdh17Q9R100 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh17Q9R100 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh17Q9R100 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh17Q9R100 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh17Q9R100 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh17Q9R100 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh17Q9R100 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cdh17Q9R100 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh17Q9R100 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh17Q9R100 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.23□□□□□ -0.13
Cdh17Q9R100 Gm12350-201ENSMUST00000121208 462 ntBASIC14.23□□□□□ -0.13
Cdh17Q9R100 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.23□□□□□ -0.13
Cdh17Q9R100 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.23□□□□□ -0.13
Cdh17Q9R100 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh17Q9R100 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.23□□□□□ -0.13
Cdh17Q9R100 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.23□□□□□ -0.13
Cdh17Q9R100 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.22□□□□□ -0.13
Cdh17Q9R100 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.22□□□□□ -0.13
Cdh17Q9R100 Gm18195-201ENSMUST00000207604 706 ntBASIC14.22□□□□□ -0.13
Cdh17Q9R100 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh17Q9R100 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cdh17Q9R100 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh17Q9R100 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Cdh17Q9R100 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh17Q9R100 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh17Q9R100 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh17Q9R100 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh17Q9R100 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh17Q9R100 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh17Q9R100 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.21□□□□□ -0.13
Cdh17Q9R100 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh17Q9R100 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.21□□□□□ -0.13
Cdh17Q9R100 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.21□□□□□ -0.13
Cdh17Q9R100 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.21□□□□□ -0.13
Cdh17Q9R100 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cdh17Q9R100 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms