Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Nubp2Q9R061 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.98□□□□□ -0.33
Nubp2Q9R061 Gm14822-201ENSMUST00000122247 291 ntBASIC12.98□□□□□ -0.33
Nubp2Q9R061 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Gm25911-201ENSMUST00000157621 56 ntBASIC12.98□□□□□ -0.33
Nubp2Q9R061 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Nubp2Q9R061 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp2Q9R061 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp2Q9R061 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp2Q9R061 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp2Q9R061 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp2Q9R061 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp2Q9R061 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp2Q9R061 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp2Q9R061 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp2Q9R061 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp2Q9R061 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nubp2Q9R061 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.97□□□□□ -0.33
Nubp2Q9R061 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp2Q9R061 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC12.97□□□□□ -0.33
Nubp2Q9R061 Gm18246-201ENSMUST00000221023 728 ntBASIC12.97□□□□□ -0.33
Nubp2Q9R061 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nubp2Q9R061 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Nubp2Q9R061 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp2Q9R061 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp2Q9R061 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Nubp2Q9R061 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.97□□□□□ -0.33
Nubp2Q9R061 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Nubp2Q9R061 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp2Q9R061 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp2Q9R061 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp2Q9R061 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp2Q9R061 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Nubp2Q9R061 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp2Q9R061 AC119177.1-201ENSMUST00000227647 1332 ntBASIC12.96□□□□□ -0.33
Nubp2Q9R061 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.96□□□□□ -0.33
Nubp2Q9R061 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Nubp2Q9R061 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Nubp2Q9R061 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp2Q9R061 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.33
Nubp2Q9R061 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.96□□□□□ -0.33
Nubp2Q9R061 H2af-ps-201ENSMUST00000119066 295 ntBASIC12.96□□□□□ -0.33
Nubp2Q9R061 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp2Q9R061 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp2Q9R061 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp2Q9R061 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp2Q9R061 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp2Q9R061 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp2Q9R061 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp2Q9R061 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Nubp2Q9R061 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp2Q9R061 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nubp2Q9R061 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Nubp2Q9R061 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nubp2Q9R061 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nubp2Q9R061 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nubp2Q9R061 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nubp2Q9R061 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.96□□□□□ -0.34
Nubp2Q9R061 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Nubp2Q9R061 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Nubp2Q9R061 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms