Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.91□□□□□ -0.34
Nubp1Q9R060 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Gm24694-201ENSMUST00000180054 110 ntBASIC12.91□□□□□ -0.34
Nubp1Q9R060 Gm27663-201ENSMUST00000184839 110 ntBASIC12.91□□□□□ -0.34
Nubp1Q9R060 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Gm7439-201ENSMUST00000214053 835 ntBASIC12.91□□□□□ -0.34
Nubp1Q9R060 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Gm19189-201ENSMUST00000221689 754 ntBASIC12.91□□□□□ -0.34
Nubp1Q9R060 AC102542.1-201ENSMUST00000225204 1138 ntBASIC12.91□□□□□ -0.34
Nubp1Q9R060 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.91□□□□□ -0.34
Nubp1Q9R060 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC12.91□□□□□ -0.34
Nubp1Q9R060 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Nubp1Q9R060 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nubp1Q9R060 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Gm15487-201ENSMUST00000122373 465 ntBASIC12.9□□□□□ -0.34
Nubp1Q9R060 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Gm29011-201ENSMUST00000191059 712 ntBASIC12.9□□□□□ -0.34
Nubp1Q9R060 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nubp1Q9R060 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.9□□□□□ -0.34
Nubp1Q9R060 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nubp1Q9R060 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nubp1Q9R060 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Gm37785-201ENSMUST00000195783 2408 ntBASIC12.9□□□□□ -0.34
Nubp1Q9R060 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nubp1Q9R060 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nubp1Q9R060 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Nubp1Q9R060 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nubp1Q9R060 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nubp1Q9R060 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC12.89□□□□□ -0.35
Nubp1Q9R060 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Nubp1Q9R060 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Nubp1Q9R060 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nubp1Q9R060 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nubp1Q9R060 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nubp1Q9R060 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nubp1Q9R060 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.89□□□□□ -0.35
Nubp1Q9R060 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nubp1Q9R060 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nubp1Q9R060 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nubp1Q9R060 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nubp1Q9R060 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Nubp1Q9R060 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Nubp1Q9R060 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms