Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Clcf1Q9QZM3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Clcf1Q9QZM3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Gm16026-204ENSMUST00000162652 683 ntBASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Gm5312-201ENSMUST00000203728 547 ntBASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Gm18057-201ENSMUST00000208220 503 ntBASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Clcf1Q9QZM3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Clcf1Q9QZM3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms