Protein–RNA interactions for Protein: Q9JM99

Prg4, Proteoglycan 4, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prg4Q9JM99 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Prg4Q9JM99 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.28
Prg4Q9JM99 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prg4Q9JM99 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prg4Q9JM99 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prg4Q9JM99 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prg4Q9JM99 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prg4Q9JM99 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Prg4Q9JM99 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Prg4Q9JM99 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.27□□□□□ -0.28
Prg4Q9JM99 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Gm12882-201ENSMUST00000121696 517 ntBASIC13.27□□□□□ -0.29
Prg4Q9JM99 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Gm25925-201ENSMUST00000158314 306 ntBASIC13.27□□□□□ -0.29
Prg4Q9JM99 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Prg4Q9JM99 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.27□□□□□ -0.29
Prg4Q9JM99 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prg4Q9JM99 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.27□□□□□ -0.29
Prg4Q9JM99 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.27□□□□□ -0.29
Prg4Q9JM99 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Prg4Q9JM99 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 BC001981-202ENSMUST00000191393 1545 ntBASIC13.26□□□□□ -0.29
Prg4Q9JM99 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.26□□□□□ -0.29
Prg4Q9JM99 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.26□□□□□ -0.29
Prg4Q9JM99 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.26□□□□□ -0.29
Prg4Q9JM99 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.26□□□□□ -0.29
Prg4Q9JM99 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Prg4Q9JM99 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prg4Q9JM99 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prg4Q9JM99 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Prg4Q9JM99 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.25□□□□□ -0.29
Prg4Q9JM99 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Prg4Q9JM99 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prg4Q9JM99 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.25□□□□□ -0.29
Prg4Q9JM99 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Prg4Q9JM99 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prg4Q9JM99 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prg4Q9JM99 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Prg4Q9JM99 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Prg4Q9JM99 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prg4Q9JM99 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prg4Q9JM99 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Prg4Q9JM99 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prg4Q9JM99 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prg4Q9JM99 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Prg4Q9JM99 Gm13223-201ENSMUST00000118609 747 ntBASIC13.25□□□□□ -0.29
Prg4Q9JM99 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Prg4Q9JM99 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Prg4Q9JM99 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Prg4Q9JM99 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms