Protein–RNA interactions for Protein: Q9JL61

Rfx5, DNA-binding protein Rfx5, mousemouse

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx5Q9JL61 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Rfx5Q9JL61 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Gm6415-201ENSMUST00000118488 348 ntBASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Rfx5Q9JL61 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 Gm37277-201ENSMUST00000194052 1111 ntBASIC15.4■□□□□ 0.06
Rfx5Q9JL61 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.4■□□□□ 0.06
Rfx5Q9JL61 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.4■□□□□ 0.06
Rfx5Q9JL61 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Rfx5Q9JL61 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Gm14042-201ENSMUST00000120139 833 ntBASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Gm28630-201ENSMUST00000187806 498 ntBASIC15.39■□□□□ 0.05
Rfx5Q9JL61 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Rfx5Q9JL61 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms