Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Gm26308-201ENSMUST00000157768 69 ntBASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Gm8396-201ENSMUST00000057361 823 ntBASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.05□□□□□ -0.16
Upk3aQ9JKX8 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3aQ9JKX8 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Upk3aQ9JKX8 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Upk3aQ9JKX8 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3aQ9JKX8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3aQ9JKX8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3aQ9JKX8 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3aQ9JKX8 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.04□□□□□ -0.16
Upk3aQ9JKX8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3aQ9JKX8 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Upk3aQ9JKX8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3aQ9JKX8 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3aQ9JKX8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3aQ9JKX8 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3aQ9JKX8 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3aQ9JKX8 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Upk3aQ9JKX8 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3aQ9JKX8 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3aQ9JKX8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Upk3aQ9JKX8 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Upk3aQ9JKX8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Gm6539-201ENSMUST00000119157 1064 ntBASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Gm5312-201ENSMUST00000203728 547 ntBASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Gm18049-201ENSMUST00000208909 581 ntBASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Upk3aQ9JKX8 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk3aQ9JKX8 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.02□□□□□ -0.16
Upk3aQ9JKX8 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk3aQ9JKX8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk3aQ9JKX8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk3aQ9JKX8 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.02□□□□□ -0.16
Upk3aQ9JKX8 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk3aQ9JKX8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk3aQ9JKX8 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Upk3aQ9JKX8 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk3aQ9JKX8 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Upk3aQ9JKX8 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Gm9824-201ENSMUST00000178707 561 ntBASIC14.02□□□□□ -0.17
Upk3aQ9JKX8 Gm29541-201ENSMUST00000191351 678 ntBASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms