Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 Gm8598-201ENSMUST00000221184 836 ntBASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Cacna1fQ9JIS7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1fQ9JIS7 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1fQ9JIS7 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1fQ9JIS7 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1fQ9JIS7 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1fQ9JIS7 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.36■□□□□ 0.21
Cacna1fQ9JIS7 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1fQ9JIS7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1fQ9JIS7 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1fQ9JIS7 Gm11803-201ENSMUST00000119966 444 ntBASIC16.36■□□□□ 0.21
Cacna1fQ9JIS7 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cacna1fQ9JIS7 Gm37714-201ENSMUST00000194742 342 ntBASIC16.36■□□□□ 0.21
Cacna1fQ9JIS7 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1fQ9JIS7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1fQ9JIS7 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Cacna1fQ9JIS7 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1fQ9JIS7 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC16.36■□□□□ 0.21
Cacna1fQ9JIS7 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC16.36■□□□□ 0.21
Cacna1fQ9JIS7 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Cacna1fQ9JIS7 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Cacna1fQ9JIS7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Gm12485-201ENSMUST00000119641 291 ntBASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Gm12416-201ENSMUST00000120911 1008 ntBASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Gm8835-201ENSMUST00000173096 1169 ntBASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Carlr-201ENSMUST00000181515 2574 ntBASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Cacna1fQ9JIS7 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Cacna1fQ9JIS7 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
Cacna1fQ9JIS7 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cacna1fQ9JIS7 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cacna1fQ9JIS7 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cacna1fQ9JIS7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cacna1fQ9JIS7 Gm15824-201ENSMUST00000119516 955 ntBASIC16.33■□□□□ 0.21
Cacna1fQ9JIS7 Gm13385-201ENSMUST00000121089 220 ntBASIC16.33■□□□□ 0.21
Cacna1fQ9JIS7 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC16.33■□□□□ 0.21
Cacna1fQ9JIS7 Gm14451-201ENSMUST00000121581 1542 ntBASIC16.33■□□□□ 0.21
Cacna1fQ9JIS7 AC161252.3-201ENSMUST00000225465 1549 ntBASIC16.33■□□□□ 0.21
Cacna1fQ9JIS7 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Cacna1fQ9JIS7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Cacna1fQ9JIS7 Gm42471-201ENSMUST00000201457 1865 ntBASIC16.33■□□□□ 0.2
Cacna1fQ9JIS7 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1fQ9JIS7 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1fQ9JIS7 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1fQ9JIS7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Cacna1fQ9JIS7 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms