Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
OtofQ9ESF1 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.39□□□□□ -0.11
OtofQ9ESF1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.39□□□□□ -0.11
OtofQ9ESF1 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
OtofQ9ESF1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
OtofQ9ESF1 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.38□□□□□ -0.11
OtofQ9ESF1 AC159006.1-201ENSMUST00000226396 258 ntBASIC14.38□□□□□ -0.11
OtofQ9ESF1 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Gm9797-201ENSMUST00000052902 613 ntBASIC14.38□□□□□ -0.11
OtofQ9ESF1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.38□□□□□ -0.11
OtofQ9ESF1 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
OtofQ9ESF1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.38□□□□□ -0.11
OtofQ9ESF1 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.38□□□□□ -0.11
OtofQ9ESF1 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
OtofQ9ESF1 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
OtofQ9ESF1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
OtofQ9ESF1 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
OtofQ9ESF1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
OtofQ9ESF1 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
OtofQ9ESF1 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.37□□□□□ -0.11
OtofQ9ESF1 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
OtofQ9ESF1 Gm28760-201ENSMUST00000185995 736 ntBASIC14.37□□□□□ -0.11
OtofQ9ESF1 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.37□□□□□ -0.11
OtofQ9ESF1 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
OtofQ9ESF1 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
OtofQ9ESF1 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
OtofQ9ESF1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
OtofQ9ESF1 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
OtofQ9ESF1 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
OtofQ9ESF1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
OtofQ9ESF1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
OtofQ9ESF1 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.37□□□□□ -0.11
OtofQ9ESF1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
OtofQ9ESF1 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC14.36□□□□□ -0.11
OtofQ9ESF1 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
OtofQ9ESF1 Gm44608-201ENSMUST00000206827 855 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms