Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Gm44492-201ENSMUST00000197012 141 ntBASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Gm43767-201ENSMUST00000198933 381 ntBASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Tubb3Q9ERD7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Tubb3Q9ERD7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubb3Q9ERD7 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubb3Q9ERD7 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
Tubb3Q9ERD7 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubb3Q9ERD7 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.52□□□□□ -0.08
Tubb3Q9ERD7 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubb3Q9ERD7 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubb3Q9ERD7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubb3Q9ERD7 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubb3Q9ERD7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubb3Q9ERD7 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubb3Q9ERD7 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.52□□□□□ -0.08
Tubb3Q9ERD7 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Tubb3Q9ERD7 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.08
Tubb3Q9ERD7 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Gm26308-201ENSMUST00000157768 69 ntBASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Tubb3Q9ERD7 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Gm18246-201ENSMUST00000221023 728 ntBASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Tubb3Q9ERD7 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms