Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC19.94■□□□□ 0.78
Cpsf1Q9EPU4 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC19.94■□□□□ 0.78
Cpsf1Q9EPU4 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpsf1Q9EPU4 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpsf1Q9EPU4 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cpsf1Q9EPU4 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpsf1Q9EPU4 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cpsf1Q9EPU4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC19.94■□□□□ 0.78
Cpsf1Q9EPU4 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC19.94■□□□□ 0.78
Cpsf1Q9EPU4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpsf1Q9EPU4 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC19.94■□□□□ 0.78
Cpsf1Q9EPU4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Cpsf1Q9EPU4 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Cpsf1Q9EPU4 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Cpsf1Q9EPU4 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cpsf1Q9EPU4 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Gm12134-201ENSMUST00000122109 520 ntBASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Gm9522-201ENSMUST00000182394 926 ntBASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Gm12620-201ENSMUST00000119791 1986 ntBASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Gm12612-201ENSMUST00000140182 1986 ntBASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC19.93■□□□□ 0.78
Cpsf1Q9EPU4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Gm12490-201ENSMUST00000120255 560 ntBASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Gm37714-201ENSMUST00000194742 342 ntBASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Gm20445-201ENSMUST00000061905 565 ntBASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cpsf1Q9EPU4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cpsf1Q9EPU4 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf1Q9EPU4 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
Cpsf1Q9EPU4 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf1Q9EPU4 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC19.91■□□□□ 0.78
Cpsf1Q9EPU4 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf1Q9EPU4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf1Q9EPU4 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Cpsf1Q9EPU4 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf1Q9EPU4 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf1Q9EPU4 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf1Q9EPU4 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf1Q9EPU4 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf1Q9EPU4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf1Q9EPU4 Gm15393-201ENSMUST00000120499 219 ntBASIC19.91■□□□□ 0.78
Cpsf1Q9EPU4 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC19.91■□□□□ 0.78
Cpsf1Q9EPU4 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf1Q9EPU4 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cpsf1Q9EPU4 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC19.91■□□□□ 0.78
Cpsf1Q9EPU4 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms