Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Gm14722-201ENSMUST00000118943 689 ntBASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC13.36□□□□□ -0.27
Hmg20aQ9DC33 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Gm18101-201ENSMUST00000215769 548 ntBASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Hmg20aQ9DC33 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Gm11355-201ENSMUST00000121120 306 ntBASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Gm44430-201ENSMUST00000203376 995 ntBASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Gm18041-201ENSMUST00000218210 618 ntBASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hmg20aQ9DC33 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms