Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Grk6-205ENSMUST00000224653 2976 ntBASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
ShpkQ9D5J6 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Gm8318-201ENSMUST00000182954 872 ntBASIC12.17□□□□□ -0.46
ShpkQ9D5J6 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Gm18041-201ENSMUST00000218210 618 ntBASIC12.17□□□□□ -0.46
ShpkQ9D5J6 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
ShpkQ9D5J6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ShpkQ9D5J6 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ShpkQ9D5J6 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ShpkQ9D5J6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ShpkQ9D5J6 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.16□□□□□ -0.46
ShpkQ9D5J6 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ShpkQ9D5J6 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC12.16□□□□□ -0.46
ShpkQ9D5J6 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
ShpkQ9D5J6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ShpkQ9D5J6 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
ShpkQ9D5J6 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
ShpkQ9D5J6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
ShpkQ9D5J6 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
ShpkQ9D5J6 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
ShpkQ9D5J6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms