Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 AC124569.2-201ENSMUST00000225998 818 ntBASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Chaf1bQ9D0N7 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Chaf1bQ9D0N7 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Gm27646-201ENSMUST00000183989 110 ntBASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Chaf1bQ9D0N7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms